Publications of Vebjorn Ljosa

Vebjorn Ljosa and Anne E. Carpenter:
High-throughput screens for fluorescent dye discovery,
Trends in Biotechnology, 2008. To appear..
[Abstract] [Paper (PDF)]

Vebjorn Ljosa and Ambuj K. Singh:
Top-k Spatial Joins of Probabilistic Objects,
in Proceedings of the 24th International Conference on Data Engineering (ICDE), p. 566--575, April, 2008.
[Abstract] [Paper (PDF)] [Slides (PDF)] [Talk (MP3)] [Movie] [Data] [Software]

Vebjorn Ljosa and Ambuj K. Singh:
APLA: Indexing Arbitrary Probability Distributions,
in Proceedings of the 23rd International Conference on Data Engineering (ICDE), p. 946-955, April, 2007, doi:10.1109/ICDE.2007.367940.
[Abstract] [Paper (PDF)] [Publisher's page]

Vebjorn Ljosa and Ambuj K. Singh:
Probabilistic Segmentation and Analysis of Horizontal Cells,
in Proceedings of the 2006 IEEE International Conference on Data Mining (ICDM), p. 980-985, December, 2006, doi:10.1109/ICDM.2006.129.
[Abstract] [Paper (PDF)] [Slides (PDF)] [Publisher's page] [Software]

Vebjorn Ljosa and Ambuj K. Singh:
Probabilistic segmentation of horizontal cells,
in Proceedings of the 2006 workshop on multiscale biological imaging, data mining & informatics (Bioimage Informatics), p. 39--40, September, 2006.
[Abstract] [Paper (PDF)] [Software]

Vebjorn Ljosa, Arnab Bhattacharya, and Ambuj K. Singh:
LB-Index: A Multi-Resolution Index Structure for Images,
in Proceedings of the 22nd International Conference on Data Engineering (ICDE), April, 2006, doi:10.1109/ICDE.2006.85.
Poster and short paper.
[Paper (PDF)] [Publisher's page] [Data]

Vebjorn Ljosa, Arnab Bhattacharya, and Ambuj K. Singh:
Indexing Spatially Sensitive Distance Measures Using Multi-Resolution Lower Bounds,
in Proceedings of the 10th International Conference on Extending Database Technology (EDBT), p. 865-883, March, 2006, doi:10.1007/11687238_51.
[Abstract] [Paper (PDF)] [Slides (PDF)] [Publisher's page] [Data]

Arnab Bhattacharya, Vebjorn Ljosa, Jia-Yu Pan, Mark R. Verardo, Hyungjeong Yang, Christos Faloutsos, and Ambuj K. Singh:
ViVo: Visual vocabulary construction for mining biomedical images,
in Proceedings of the Fifth IEEE International Conference on Data Mining (ICDM), p. 50--57, November, 2005, doi:10.1109/ICDM.2005.151.
Received one of five "best student paper" awards.
[Abstract] [Paper (PDF)] [Publisher's page]

Ambuj K. Singh, Arnab Bhattacharya, and Vebjorn Ljosa:
Current challenges in bioimage database design,
in Proceedings of the International Workshop on Bioimage Data Mining and Informatics, IEEE Computational Systems Bioinformatics Conference (CSB), p. 375--379, August, 2005, doi:10.1109/CSBW.2005.47.
Invited talk and abstract.
[Abstract] [Paper (PDF)] [Publisher's page]

Chao-I Chen, Xiaofang Lei, Vebjorn Ljosa, Thomas A. McCloskey, Chiou-Wei Tsai, S. Rao Jammalamadaka, Joel H. Rothman, and Ambuj K. Singh:
A Bayesian approach toward analyzing the network of genes involved in C. elegans programmed cell death,
West Coast Worm Meeting, 2004.
Poster and talk.
[Abstract] [Publisher's page]

Tamer Kahveci, Vebjorn Ljosa, and Ambuj K. Singh:
Speeding up whole-genome alignment by indexing frequency vectors,
Bioinformatics, 20(13):2122--2134, 2004, doi:10.1093/bioinformatics/bth212.
[Abstract] [Paper (PDF)] [Publisher's page]


Last updated: 2008-04-13