Publications of Vebjorn Ljosa

Vebjorn Ljosa and Anne E. Carpenter:
"High-throughput screens for fluorescent dye discovery,"
Trends in Biotechnology, 26(10), p. 527–530, 2008, doi:10.1016/j.tibtech.2008.06.008.
Abstract | Manuscript (PDF) | Publisher's page

Vebjorn Ljosa and Ambuj K. Singh:
"APLA: Indexing Arbitrary Probability Distributions,"
in Proceedings of the 23rd International Conference on Data Engineering (ICDE), p. 946-955, April, 2007, doi:10.1109/ICDE.2007.367940.
Abstract | Paper (PDF) | Publisher's page

Vebjorn Ljosa and Ambuj K. Singh:
"Probabilistic Segmentation and Analysis of Horizontal Cells,"
in Proceedings of the 2006 IEEE International Conference on Data Mining (ICDM), p. 980-985, December, 2006, doi:10.1109/ICDM.2006.129.
Abstract | Paper (PDF) | Slides (PDF) | Publisher's page | Software

Vebjorn Ljosa and Ambuj K. Singh:
"Probabilistic segmentation of horizontal cells,"
in Proceedings of the 2006 workshop on multiscale biological imaging, data mining & informatics (Bioimage Informatics), p. 39–40, September, 2006.
Abstract | Paper (PDF) | Software

Vebjorn Ljosa, Arnab Bhattacharya, and Ambuj K. Singh:
"LB-Index: A Multi-Resolution Index Structure for Images,"
in Proceedings of the 22nd International Conference on Data Engineering (ICDE), April, 2006, doi:10.1109/ICDE.2006.85.
Poster and short paper.
Paper (PDF) | Publisher's page | Data

Vebjorn Ljosa, Arnab Bhattacharya, and Ambuj K. Singh:
"Indexing Spatially Sensitive Distance Measures Using Multi-Resolution Lower Bounds,"
in Proceedings of the 10th International Conference on Extending Database Technology (EDBT), p. 865-883, March, 2006, doi:10.1007/11687238_51.
Abstract | Paper (PDF) | Slides (PDF) | Publisher's page | Data

Arnab Bhattacharya, Vebjorn Ljosa, Jia-Yu Pan, Mark R. Verardo, Hyungjeong Yang, Christos Faloutsos, and Ambuj K. Singh:
"ViVo: Visual vocabulary construction for mining biomedical images,"
in Proceedings of the Fifth IEEE International Conference on Data Mining (ICDM), p. 50–57, November, 2005, doi:10.1109/ICDM.2005.151.
Received one of five "best student paper" awards.
Abstract | Paper (PDF) | Publisher's page

Ambuj K. Singh, Arnab Bhattacharya, and Vebjorn Ljosa:
"Current challenges in bioimage database design,"
in Proceedings of the International Workshop on Bioimage Data Mining and Informatics, IEEE Computational Systems Bioinformatics Conference (CSB), p. 375–379, August, 2005, doi:10.1109/CSBW.2005.47.
Invited talk and abstract.
Abstract | Paper (PDF) | Publisher's page

Chao-I Chen, Xiaofang Lei, Vebjorn Ljosa, Thomas A. McCloskey, Chiou-Wei Tsai, S. Rao Jammalamadaka, Joel H. Rothman, and Ambuj K. Singh:
"A Bayesian approach toward analyzing the network of genes involved in C. elegans programmed cell death,"
West Coast Worm Meeting, 2004.
Poster and talk.
Abstract | Publisher's page

Tamer Kahveci, Vebjorn Ljosa, and Ambuj K. Singh:
"Speeding up whole-genome alignment by indexing frequency vectors,"
Bioinformatics, 20(13), p. 2122–2134, 2004, doi:10.1093/bioinformatics/bth212.
Abstract | Paper (PDF) | Publisher's page

Last updated: 2008-08-18